openvax / varlens

commandline manipulation of genomic variants and NGS reads
Apache License 2.0
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Variants mhc output peptides #27

Closed timodonnell closed 7 years ago

timodonnell commented 8 years ago

Output a dict of peptide binding affinities instead of just the affinity of the top peptide

Also pass only_novel_epitopes to topiary.predict_epitopes_from_variants, see https://github.com/hammerlab/topiary/issues/48#issuecomment-217298318