Removed namedtuple, other small changes in preparation for rewrite

openvax / vaxrank

Ranked vaccine peptides for personalized cancer immunotherapy

Apache License 2.0

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Removed namedtuple, other small changes in preparation for rewrite #184

Closed iskandr closed 4 years ago

iskandr commented 4 years ago

Replaced the idiosyncratic pattern of namedtuple base classes with more ordinary objects derived from Serializable
Changed Travis config to run tests on Python 3.5 (instead of 3.6) because pysam no longer supports 3.6
Had to change how tensorflow/tensorboard get installed due to dependency conflicts

coveralls commented 4 years ago

Coverage decreased (-0.08%) to 88.024% when pulling ab5bf3942e0c5d36a3c94330ff61dbcb2165bf6a on small-fixes into ba9d7196ea3733a59865b15bb5872297f55de383 on master.