search

openvax / vaxrank

Ranked vaccine peptides for personalized cancer immunotherapy
Apache License 2.0
53 stars 22 forks source link

Add IGV location and gene names to CSV report #99

Open ihodes opened 7 years ago

ihodes commented 7 years ago

e.g. 

1. 1:12903124 (A->T) (GENE-NAME) 
2. X:343941245 (G->C) (GENE-NAME2)

...

This is a nice way to quickly see all variants and diff different lists, as well as navigate to them in IGV.

iskandr commented 7 years ago

This would also be nice as an index at the top of the existing PDF and ASCII reports.

iskandr commented 7 years ago

Instead of making a new text format, let's change the CSV format to start with an IGV friendly location of the variant and the gene name.