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openworm / muscle_model

Model of C elegans body wall muscle based on Boyle & Cohen 2008
http://www.opensourcebrain.org/projects/muscle_model
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Add jneuroML to documentation here #45

Closed travs closed 9 years ago

travs commented 9 years ago

@cheelee said:

In the muscle_model repository, NeuroML2 folder. The README.md instructions ask the user to try: jnml LEMS_Figure2A.xml

but does not explain how one should get hold of jnml. For me, I found it in the jNeuroML repository, cloned it, and followed the README.md instructions there. That appeared to be successful, and I was subsequently able to run from the jNeuroML folder:

./jnml /muscle_model/NeuroML2/LEMS_Figure2A.xml

travs commented 9 years ago

Also related to #29

pgleeson commented 9 years ago

My motivation with this was to have one place with (clear?) instructions on installing jNeuroML (the main repo Readme), as they may change (e.g. the binaries are installed from Sourceforge which is not ideal).

travs commented 9 years ago

Ok, that makes sense. I was actually looking at the top-level readme by mistake. The instructions to install jNeuroML are pointed to in the readme mentioned, so this can be closed.