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openworm / owmeta

Unified, simple data access python library for data & facts about C. elegans anatomy
MIT License
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Compare info on neurotransmitters #274

Open pgleeson opened 8 years ago

pgleeson commented 8 years ago

There is information on the neurotransmitters in each C elegans neuron here:

A cellular and regulatory map of the cholinergic nervous system of C. elegans

This should be compared with the data on neurotransmitters in the latest connectome data files, and our info updated as appropriate.

Parent to #283, #284

slarson commented 8 years ago

Great catch. John White also just pointed us at this paper.

Direct links:

Table from the reference Dynamic spreadsheet containing OpenWorm neurotransmitter info

See more on the process of how spreadsheets get turned into database info here

cc: @ahrasheed @aribrich

clbarnes commented 7 years ago

There is also new expression data in this paper: http://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1005283

The machine-readable versions are in the S1 Dataset.