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openworm / tests

OpenWorm tests across various repos
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Updated muscle test #3

Open slarson opened 6 years ago

slarson commented 6 years ago

From @rgerkin:

For the muscle model, we are going to expand the range of tests to include spiking dynamics (e.g. ISI distributions) and not just waveform information, since the model in its current state wasn't really designed to replicate the waveforms. Our grad student Russell will be helping with this. Recently I got the muscle model testing with SciUnit working (Muscle Model now works with SciUnit: https://github.com/openworm/CElegansNeuroML/commits/sciunit) so it is just a matter of adding a few tests, which may involve digitizing more figures/tables. Does anyone have any digitized versions of muscle model related experimental data?

slarson commented 6 years ago

Past issue related to this: https://github.com/openworm/muscle_model/issues/64

One digitized action potential from a muscle is here: https://drive.google.com/drive/folders/0B_t3mQaA-HaMQVpGYnJhRGFBUWs