Change VCF dataset used in unit tests for data_service

ornl-oxford / genben

Benchmarking of software frameworks, and systems for storage and compute over large-scale genomic data.

MIT License

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Change VCF dataset used in unit tests for data_service #37

Closed eauel closed 5 years ago

eauel commented 5 years ago

This PR changes the data set used in the unit tests for the data service. These unit tests previously used _trio.201006.ychr.genotypes.vcf, which would not contain callset/GT upon conversion to Zarr format. Because of this, any test that requires this field would result in a KeyError.

The data set has been replaced with _trio.201006.ychr.genotypes.vcf.