Open yxqd opened 2 years ago
Tried a fresh install of imars3d (conda-forge channel added)
$ conda create -n imars3d-py38 python=3.8 $ conda install pytest pyyaml numpy scipy matplotlib astropy mpi4py mpich psutil scikit-image tomopy dxchange progressbar2
When running test tests/imars3d/recon/test_mpi.py, got an error
tests/imars3d/recon/test_mpi.py
INTEL MKL ERROR: /.../miniconda3/envs/imars3d-py38/lib/python3.8/site-packages/mkl_fft/../../../libmkl_core.so.1: invalid ELF header. Intel MKL FATAL ERROR: Cannot load libmkl_core.so.1.
when tomopy 1.11 is used.
mkl versions installed:
# Name Version Build Channel mkl 2021.4.0 h06a4308_640 mkl_fft 1.3.1 py38h8666266_1 conda-forge
Workaround: installed tomopy 1.10.1
It could be related to the mkl conda package? The one installed with tomopy 1.10.1 is 2020.4. The one installed with tomopy 1.11 is 2021.4.
mkl
2020.4
2021.4
Tried a fresh install of imars3d (conda-forge channel added)
When running test
tests/imars3d/recon/test_mpi.py
, got an errorwhen tomopy 1.11 is used.
mkl versions installed:
Workaround: installed tomopy 1.10.1