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oschwengers / asap

A scalable bacterial genome assembly, annotation and analysis pipeline
https://doi.org/10.1371/journal.pcbi.1007134
GNU General Public License v3.0
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helper tool [suggestion] #21

Open telatin opened 3 years ago

telatin commented 3 years ago

Hi, if can be of help for others, I made a tool to generate the Excel file from the command line: https://github.com/quadram-institute-bioscience/start-asap/

It's easily installable via Miniconda with conda install -c bioconda start-asap.

oschwengers commented 3 years ago

Hi @telatin , very nice piece of help! Thanks a lot - it's indeed very much appreciated. I'll give it a try and add it to the ASA³P readme. Until then I'll leave this open so that other can find it.