Decreasing the number of columns in the "predation-accessibility.csv" file

[agruss2]

@jhpoelen The parameters that are provided in the "predation-accessibility.csv" file are the accessibility coefficients of focal and background organisms to focal organisms. This information is provided in the form of a matrix, where a given line provides coefficients reflecting the accessibility of a given focal organism or of a given background organism to the different bakcground organisms represented in the OSMOSE model. Therefore, in the "predation-accessibility.csv" file, there should be more lines than columns. Here is an example: I just ran a test with the bridge between FishBase/SeaLifeBase and OSMOSE, where I queried parameter values for an OSMOSE model for the Iceland Shelf/Sea ecosystem. The phytoplankton and zooplankton groups were defined as background functional groups (as is the case for all OSMOSE models). I also defined the "invertpelagicsm" functional group as a background functional group. Then, I got the following "predation-accessibility.csv" file (provided here in the .xlsx format): predation-accessibility.xlsx For this "predation-accessibility.csv" file to be useable in OSMOSE, the last three columns that are currently provided (for phytoplankton, zooplankton, and invertpelagicsm) should not appear in the file.

--> Could you please correct for this? Once you are done, please let me know so that I can run a new test with the bridge between FishBase/SeaLifeBase and OSMOSE and, eventually, close the present issue. Many thanks.

[jhpoelen]

Thanks for your detailed description. I've implemented the changes as suggested. Please confirm.

[agruss2]

@jhpoelen I just ran a test and can confirm that the present issue has been solved; I can therefore close it now. Many thanks.