oushujun / EDTA

Extensive de-novo TE Annotator
https://genomebiology.biomedcentral.com/articles/10.1186/s13059-019-1905-y
GNU General Public License v3.0
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Errors while testing panEDTA #361

Closed blavetn closed 1 year ago

blavetn commented 1 year ago

Hello, I got an error running panEDTA sh ../panEDTA.sh -g genome.list.csv -c genome.cds.fa -l ../database/athrep.updated.nonredun.fasta -t 20 -f 3

oushujun commented 1 year ago

Sorry for the delay. Did you solve the error?

Shujun

blavetn commented 1 year ago

It was my mistake, I had used sh instead of bash to run panEDTA.sh script.