search

oushujun / EDTA

Extensive de-novo TE Annotator
https://genomebiology.biomedcentral.com/articles/10.1186/s13059-019-1905-y
GNU General Public License v3.0
315 stars 70 forks source link

I just found that this script in the (../../share/RepeatMasker/) folder will not have this error, maybe can copy the input file, I think it can try?If you tried, can you tell me the result? #450

Open chenHuiRu8 opened 3 months ago

chenHuiRu8 commented 3 months ago 
          I just found that this script in the (../../share/RepeatMasker/) folder will not have this error, maybe can copy the input file, I think it can try?If you tried, can you tell me the result?

Originally posted by @wuyh0328 in https://github.com/oushujun/EDTA/issues/449#issuecomment-2011317472 I just solved the problem. export PERL5LIB=$PERL5LIB:/share/home/stu_chenhuiru/miniconda3/envs/EDTA/share/RepeatMasker

wuyh0328 commented 3 months ago

Wow, did you add the perl environment with RepeatMasker to the whole conda environment? You are so good! So you can successfully generate the file，right?

chenHuiRu8 commented 3 months ago

yes

------------------ 原始邮件 ------------------ 发件人: @.>; 发送时间: 2024年3月21日(星期四) 下午3:39 收件人: @.>; 抄送: @.>; @.>; 主题: Re: [oushujun/EDTA] I just found that this script in the (../../share/RepeatMasker/) folder will not have this error, maybe can copy the input file, I think it can try?If you tried, can you tell me the result? (Issue #450)

Wow, did you add the perl environment with RepeatMasker to the whole conda environment? You are so good! So you can successfully generate the file，right?

— Reply to this email directly, view it on GitHub, or unsubscribe. You are receiving this because you authored the thread.Message ID: @.***>

wuyh0328 commented 3 months ago

yes … ------------------ 原始邮件 ------------------ 发件人: @.>; 发送时间: 2024年3月21日(星期四) 下午3:39 收件人: @.>; 抄送: @.>; @.>; 主题: Re: [oushujun/EDTA] I just found that this script in the (../../share/RepeatMasker/) folder will not have this error, maybe can copy the input file, I think it can try?If you tried, can you tell me the result? (Issue #450) Wow, did you add the perl environment with RepeatMasker to the whole conda environment? You are so good! So you can successfully generate the file，right? — Reply to this email directly, view it on GitHub, or unsubscribe. You are receiving this because you authored the thread.Message ID: @.***>

NICE!