I am using panEDTA to annotate my genomes. I was happy to find out that with the last EDTA version the _INT and _LTR TE models receive the same family name. However, when running panEDTA to obtain the pangenomic TE library, the IDs of all TE families are changed again and _LTR and _INT models for the same LTR-RT family receive random IDs that do not match.
It would be great if in later EDTA versions both _LTR and _INT models received the same TE_xxxxxx name.
Hi Shujun
I am using panEDTA to annotate my genomes. I was happy to find out that with the last EDTA version the _INT and _LTR TE models receive the same family name. However, when running panEDTA to obtain the pangenomic TE library, the IDs of all TE families are changed again and _LTR and _INT models for the same LTR-RT family receive random IDs that do not match.
It would be great if in later EDTA versions both _LTR and _INT models received the same TE_xxxxxx name.
Thanks!