LTR_retriever is a highly accurate and sensitive program for identification of LTR retrotransposons; The LTR Assembly Index (LAI) is also included in this package.
Upon first encountering an ID, the counts for solo and intact are both initialized to zero, failing to count the first occurrence of a solo or intact element for each ID.
Upon first encountering an ID, the counts for solo and intact are both initialized to zero, failing to count the first occurrence of a solo or intact element for each ID.