search

oushujun / LTR_retriever

LTR_retriever is a highly accurate and sensitive program for identification of LTR retrotransposons; The LTR Assembly Index (LAI) is also included in this package.
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5813529/
GNU General Public License v3.0
188 stars 40 forks source link

Does the software work in animal genomes？ #73

Closed zhangleigloria closed 4 years ago

zhangleigloria commented 4 years ago

Hello，does the software work in animal genomes？

oushujun commented 4 years ago

LTR_retriever works in animal genomes. LAI also works if the genome has ≥5% total LTR sequences and ≥0.1% intact LTR sequences.

Shujun