Respect quiet=True in DeseqStats.lfc_shrink

owkin / PyDESeq2

A Python implementation of the DESeq2 pipeline for bulk RNA-seq DEA.

https://pydeseq2.readthedocs.io/en/latest/

MIT License

573 stars 60 forks source link

Respect quiet=True in DeseqStats.lfc_shrink #304

Closed maltekuehl closed 1 week ago

maltekuehl commented 1 month ago

What does your PR implement?

Currently, DeseqStats.lfc_shrink does not respect self.quiet when printing self.results_df at the end of the method. This PR adds checks for self.quiet for the missing print statements.