owlcollab / owltools

OWLTools
BSD 3-Clause "New" or "Revised" License
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map2slim memory requirements #263

Open emrobe opened 6 years ago

emrobe commented 6 years ago

Hi, I'm trying to use the --map2slim functionality to map a gaf-file to metagenomics slim. It' s 90+ GB in size. The process owltools starts swapping and dies at 0,5 TB (Yes, Terabyte) memory usage. Any way around this (except splitting my file into X pieces after prototyping size vs. memory usage)?