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oxford-pharmacoepi / MegaStudy

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n_missing_quantity not found in .data #64

Open martinr55 opened 3 months ago

martinr55 commented 3 months ago

Using duckdb I get the following error. It occurs during the final check ("diagnosticsSummary").

Error in dplyr::mutate(): ℹ In argument: missing_quantity_exp_start_end_days_supply = glue::glue("\n {.data$n_missing_quantity}, {.data$n_missing_drug_exposure_start_date}, {.data$n_missing_drug_exposure_end_date}, {.data$n_missing_days_supply}"). Caused by error: ! Failed to evaluate glue component {.data$n_missing_quantity} Caused by error in .data$n_missing_quantity: ! Column n_missing_quantity not found in .data.

tiozab commented 3 months ago

@martinr55 have you activated and restored the renv? It seems like you have used a more recent version of DrugExposureDiagnostics.