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oxfordmmm / gnomonicus

Python code to integrate results of tb-pipeline and provide an antibiogram, mutations and variants
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Feat/table update script #53

Closed JeremyWesthead closed 5 months ago

JeremyWesthead commented 5 months ago

Will be slow on the first run as it has to instantiate gumpy.Gene objects (which are then dumped to pickle), but ~4s per sample after this has been done

JeremyWesthead commented 5 months ago

It will overwrite - there is an option for prefixing outputs with an arbitrary string though

JeremyWesthead commented 5 months ago

Fixed now