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pFindStudio / pGlyco2

pGlyco is a software tool dedicated for the analysis of intact glycopeptides/glycoproteins using mass spectrometry.
http://pfind.ict.ac.cn/software/pGlyco/
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Minimum peptide length #36

Open lindaz711 opened 4 years ago

lindaz711 commented 4 years ago

Is there a way to specify the minimum or maximum peptide length for a search? I noticed that the default value for minimum peptide length is 6 from the output .pglyco file but couldn't find a way to modify that value. Thank you.

jalew188 commented 4 years ago

@lindaz711 The only way to change it is: save the parameter file in GUI, modified the parameter file using a text editor, and run pGlyco with the command line (cd to bin path of pGlyco installation folder, and run pGlycoDB.exe path\of\your\parameter\file)