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pFindStudio / pGlyco3

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gLabel TypeError: 'NoneType' object is not callable #42

Open trvadams opened 1 month ago

trvadams commented 1 month ago

Hello,

I am trying to generate annotated MS2s after a successful pGlyco search. However, I'm getting an error when trying to load the .raw file:

Traceback (most recent call last): File "gLabel-GP.py", line 1417, in OnMGFButton File "gLabel-GP.py", line 471, in ReadMGF TypeError: 'NoneType' object is not callable

This seems to trip up the program and doesn't allow the annotation to proceed after loading the pGlycoRes file and hitting 'Batch plot':

[START] 1th GPSM: BG505_tryp.1067.1067.2.2.dta Traceback (most recent call last): File "gLabel-GP.py", line 1407, in OnBatchPlotButton File "gLabel-GP.py", line 1203, in save_plot AttributeError: 'NoneType' object has no attribute 'Has_Spec'

I've tested it on old .raw files that have worked fine previously and get the same output. Is anyone else able to reproduce this?

Best, Trevor

jalew188 commented 1 month ago

ReadMGF() gets a None, this must be the raw access issue..., can you share the raw data?

trvadams commented 1 month ago

Sure, here's a Dropbox link to the raw file.