Something I observed is that there are more introns in the introns.bed file and introns.fa file than in the intron_to_transcripts.txt file.
Is this something expected?
The problem is that I tried to run RSEM, but the entries in the fasta file are more than the ones in the annotation (that is generated from intron_to_transcripts.txt file).
Something I observed is that there are more introns in the introns.bed file and introns.fa file than in the intron_to_transcripts.txt file.
Is this something expected?
The problem is that I tried to run RSEM, but the entries in the fasta file are more than the ones in the annotation (that is generated from intron_to_transcripts.txt file).