pachterlab scRNA-Seq-TCC-prep issues - Githubissues

pachterlab / scRNA-Seq-TCC-prep

Preprocessing of single-cell RNA-Seq (deprecated)

http://kallistobus.tools

GNU General Public License v3.0

62 stars 26 forks source link

issues

Newest

Newest Most commented Recently updated Oldest Least commented Least recently updated

10X detect and prep pipeline only works for python 2.7

#8 chanjed closed 5 years ago
1
tcc is a result of cellranger count or others

#7 worker000000 closed 5 years ago
1
kallisto transcriptome website is down

#6 alfonsosaera opened 6 years ago
2
Updated all Python and Ipython files to be Python3 compatible.

#5 dylanbannon closed 6 years ago
0
convert tcc_matrix.dat to txt

#4 doublehelixlf closed 7 years ago
0
Code outdated

#3 yingzhang121 opened 7 years ago
6
Very low number of cells detected

#2 maximilianh opened 7 years ago
2
Edited notebook to respect config.json

#1 jamestwebber opened 7 years ago
0