search

pachterlab / seqspec

machine-readable file format for genomic library sequence and structure
MIT License
114 stars 17 forks source link

remote onlist download with the kallisto multiple lists onlist format #31

Closed detrout closed 8 months ago

detrout commented 9 months ago

There's various test case fixes and some new test cases in addition to implementing the new features.

detrout commented 8 months ago

Ok I updated it for your new run_onlist steps.

Also one API call I changed is that join_onlist now takes a list of Onlist objects instead of filenames so it can see if the onlist is local or remote.

And then I added a few more tests.