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pachterlab / seqspec

machine-readable file format for genomic library sequence and structure
MIT License
112 stars 17 forks source link

source file for pypi #45

Closed visze closed 3 weeks ago

visze commented 3 months ago

Hi,

I want to put seqspec into bioconda. The easiest way is to go through pypi and it wil automatically update conda if there is a new pypi version.

But therefore you have also to upload the source files to pypi. So after building your distribution you also need to build the source distribution. This can be done with python setup.py sdist and afterwards uploading to pypi.

thanks!

sbooeshaghi commented 3 months ago

Thank you for doing this. I am planning on merging devel with main and pushing a minor version bump soon and in doing so will upload the source files to pypi.

visze commented 1 month ago

Hi Sina. Any updates here? would be great to push it to conda!

sbooeshaghi commented 1 month ago

Yes. I released the devel branch internally to the group I am working with and am waiting to hear feedback from them. If everything looks good then I will merge and release soon (including uploading the source files to pypi). My hope is that this will happen no later than end of September.

sbooeshaghi commented 3 weeks ago

Done. https://pypi.org/project/seqspec/0.3.0/

visze commented 5 days ago

It is on (bio)conda: https://bioconda.github.io/recipes/seqspec/README.html#package-package%20'seqspec'

sbooeshaghi commented 4 days ago

Awesome- can you push the most recent release to bioconda as well? v0.3.1

visze commented 3 days ago

Already did! But takes a while unti it is there

visze commented 3 days ago

54 people already downloaded seqspec :-)