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pachterlab / sleuth

Differential analysis of RNA-Seq
http://pachterlab.github.io/sleuth
GNU General Public License v3.0
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bug in `summary.sleuth` #180

Closed pimentel closed 6 years ago

pimentel commented 6 years ago 
d> summary(sg)
Error in data.frame(..., stringsAsFactors = FALSE) : 
  arguments imply differing number of rows: 6, 0
d> traceback()
5: stop(gettextf("arguments imply differing number of rows: %s", 
       paste(unique(nrows), collapse = ", ")), domain = NA)
4: data.frame(..., stringsAsFactors = FALSE)
3: adf(sample = obj$sample_to_covariates[["sample"]], reads_mapped = mapped_reads, 
       reads_proc = n_processed, frac_mapped = round(mapped_reads/n_processed, 
           4), bootstraps_present = n_bs, bootstraps_used = n_bs_read)
2: summary.sleuth(sg)
1: summary(sg)