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pacific-hake / pacifichakemse

A Management Strategy Evaluation for Pacific Hake
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errors generated from run_om(), more specifically load_dat_om() #12

Closed kristinmarshall-NOAA closed 2 years ago

kristinmarshall-NOAA commented 2 years ago

I'm getting an error from load_dat_OM.R. For example - if I try to run the run_om_attainment_unfished.R file, I get an error from the run_OM() function:

Error: Can't combine ..1$Yr and ..2$Yr . The traceback takes me to:
df %>% bind_rows(new_df) at load_dat_om.R#277

Does this ring any bells for you @cgrandin? I was initially thinking it was coming from something in the recent (Nov) commits. I backed up several commits to test that but still got the error. So then, I backed up both reposall the way to the May 17 commits, and generates different earlier errors. There could definitely be some operator error on my end or something with my particular configuration.

@aaronmberger-nwfsc had you succesfully run the run_om() or run_mse() functions in the fall on your machine?

cgrandin commented 2 years ago

I'd have to see your script to figure out what's going on. I haven't seen that error before..

I did receive your email about bookdown but we are essentially at max capacity trying to get the assessment done so I haven't had a minute to think about it :(

kristinmarshall-NOAA commented 2 years ago

Closing this. Resolved with installing R4ss from github (not CRAN). Also, resolved potential package incompatibility issues by installing an earlier version of the Matrix package to be compatible with TMB, and reinstalling Rcpp. Thanks to @cgrandin for debugging help.