Basic Python scripts for loading and visualizing the data.

paip-2019 / challenge

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Basic Python scripts for loading and visualizing the data. #20

Closed JunMa11 closed 5 years ago

JunMa11 commented 5 years ago

Dear PAIP organizers,

Thanks for organizing the great challenge.

Would it be possible for you to provide some basic Python/Matlab scripts for loading and visualizing the data? e.g. MICCAI 2019 KITS Challenge

wisepaip commented 5 years ago

Hello, Thank you for the suggestion. We need to discuss the issue with our team about providing the scripts. We will let you know soon through here.

hjoonjang commented 5 years ago

@JunMa11 I've released a sample code, 'utils.py' in this repo, so you can read it and try visualizing with the given mask data.

Unfortunately, the sample code does not (yet) include the svs-loading part, which is supported by well-known open sourced libraries (e.g. openslide, pyvips, etc.). We will discuss whether it should be provided or not. Anyway, I guess you may also like to see here.