palaeoverse / rphylopic

Get Silhouettes of Organisms from PhyloPic
https://rphylopic.palaeoverse.org
GNU General Public License v3.0
90 stars 9 forks source link

installation not working on Ubuntu 16.04 #18

Closed nick-youngblut closed 6 years ago

nick-youngblut commented 6 years ago

I get the following when trying to install rphylopic on my linux server:

> devtools::install_github("sckott/rphylopic")
Downloading GitHub repo sckott/rphylopic@master
from URL https://api.github.com/repos/sckott/rphylopic/zipball/master
Installation failed: error in running command
> sessionInfo()
R version 3.4.1 (2017-06-30)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Ubuntu 16.04.4 LTS

Matrix products: default
BLAS: /ebio/abt3_projects/software/miniconda3/envs/ga_R_install/lib/R/lib/libRblas.so
LAPACK: /ebio/abt3_projects/software/miniconda3/envs/ga_R_install/lib/R/lib/libRlapack.so

locale:
 [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C
 [3] LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8
 [5] LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8
 [7] LC_PAPER=en_US.UTF-8       LC_NAME=C
 [9] LC_ADDRESS=C               LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base

loaded via a namespace (and not attached):
 [1] httr_1.3.1      compiler_3.4.1  R6_2.2.2        tools_3.4.1
 [5] withr_2.1.1     curl_3.1        memoise_1.1.0   git2r_0.21.0
 [9] digest_0.6.13   devtools_1.13.5

However, devtools::install_github("sckott/rphylopic") is working for my OSX R install.

sckott commented 6 years ago

thanks for this @nick-youngblut

i assume you can install other github packges?

nick-youngblut commented 6 years ago

Yeah, it looks like devtools::install_github is the problem. It was just working a bit ago. I wonder what broke it...

Sorry to bug you!

sckott commented 6 years ago

no worries. thanks for the issue, all issues are good issues to me 😸

don't hesitate to pose any other questions