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pallassgj / bpipe

Automatically exported from code.google.com/p/bpipe
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Input files from outside working directory incorrectly redirected to working directory #63

Open GoogleCodeExporter opened 9 years ago

GoogleCodeExporter commented 9 years ago 
If you use an input splitting pattern, eg:

"s_%.txt" * [ stage_1 + stage_2 ]

And if you give this pipeline input files from outside the pipeline directory, 
and if stage_2 refers to them, it is given references to those files as if they 
are in the pipeline working directory (even though they are not).

Original issue reported on code.google.com by ssade...@gmail.com on 28 Aug 2012 at 11:43