DR/NWK: 0.12.0: nosetests: one fail

[bluefir]

Python 2.7.5, Windows 7 64-bit

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FAIL: Throws an exception when DataReader can't get a 200 response from

Traceback (most recent call last): File "C:\Python27\lib\site-packages\pandas\util\testing.py", line 765, in netw ork_wrapper return t(_args, *_kwargs) File "C:\Python27\lib\site-packages\pandas\io\tests\test_data.py", line 370, i n test_fred 15984.1) AssertionError: DATE 2013-01-01 16535.3 Name: GDP, dtype: float64 != 15984.1

Ran 3661 tests in 179.605s

FAILED (SKIP=137, failures=1)

[jreback]

thanks for the report; suspect it will work if you try again (that said we have been trying to squash failures like this)

[bluefir]

Uninstalled, installed and tried again. Still fails. Is this a big problem or just an annoyance?

[jreback]

the test is prob too restrictive and tests data which may have (and prob did change) as this works on all of the travis builds.

[bluefir]

Cool. Closing. Thanks for the quick response!

[jreback]

actually going to leave this open....its a prod to get the test fixed...thanks!

[cpcloud]

this seems to always change between those two values....what's up with that?

[jreback]

I think the last number was just revised...that's why this test is bogus

[cpcloud]

i know, but it goes back and forth every 2-3 weeks

[jtratner]

Also, the docstring on that test needs to be removed... It's totally wrong.

[jreback]

this is fixed in master now

[bluefir]

I did a fresh install of python and pandas and started getting nosetest errors for HDFStore. What's going on? Did I grab some of the more recent versions of some packages that are not supported yet?

---

Traceback (most recent call last): File "C:\Python27\lib\site-packages\pandas\io\tests\test_pytables.py", line 24 93, in test_select_as_multiple result = store.select('df1', ['A>0', 'B>0']) File "C:\Python27\lib\site-packages\pandas\io\pytables.py", line 458, in selec t return TableIterator(self, func, nrows=s.nrows, start=start, stop=stop, auto _close=auto_close).get_values() File "C:\Python27\lib\site-packages\pandas\io\pytables.py", line 984, in get_v alues results = self.func(self.start, self.stop) File "C:\Python27\lib\site-packages\pandas\io\pytables.py", line 451, in func return s.read(where=where, start=_start, stop=_stop, columns=columns, **kwar gs) File "C:\Python27\lib\site-packages\pandas\io\pytables.py", line 3153, in read

if not self.read_axes(where=where, **kwargs): File "C:\Python27\lib\site-packages\pandas\io\pytables.py", line 2524, in read _axes values = self.selection.select() File "C:\Python27\lib\site-packages\pandas\io\pytables.py", line 3747, in sele ct return self.table.table.readWhere(self.condition, start=self.start, stop=sel f.stop) File "C:\Python27\lib\site-packages\tables\table.py", line 1453, in readWhere self._where(condition, condvars, start, stop, step) ] File "C:\Python27\lib\site-packages\tables\table.py", line 1405, in _where compiled = self._compileCondition(condition, condvars) File "C:\Python27\lib\site-packages\tables\table.py", line 1284, in _compileCo ndition compiled = compile_condition(condition, typemap, indexedcols, copycols) File "C:\Python27\lib\site-packages\tables\conditions.py", line 396, in compil e_condition func = NumExpr(expr, signature, copy_args=copycols) File "C:\Python27\lib\site-packages\numexpr\necompiler.py", line 552, in NumEx pr context = getContext(kwargs, frame_depth=1) File "C:\Python27\lib\site-packages\numexpr\necompiler.py", line 473, in getCo ntext raise ValueError("Unknown keyword argument '%s'" % d.popitem()[0]) ValueError: Unknown keyword argument 'copy_args'

ERROR: test_select_dtypes (pandas.io.tests.test_pytables.TestHDFStore)

Traceback (most recent call last): File "C:\Python27\lib\site-packages\pandas\io\tests\test_pytables.py", line 20 33, in test_select_dtypes result = store.select('df', [Term('ts', '>=', Timestamp('2012-02-01'))]) File "C:\Python27\lib\site-packages\pandas\io\pytables.py", line 458, in selec t return TableIterator(self, func, nrows=s.nrows, start=start, stop=stop, auto _close=auto_close).get_values() File "C:\Python27\lib\site-packages\pandas\io\pytables.py", line 984, in get_v alues results = self.func(self.start, self.stop) File "C:\Python27\lib\site-packages\pandas\io\pytables.py", line 451, in func return s.read(where=where, start=_start, stop=_stop, columns=columns, **kwar gs) File "C:\Python27\lib\site-packages\pandas\io\pytables.py", line 3153, in read

if not self.read_axes(where=where, **kwargs):

File "C:\Python27\lib\site-packages\pandas\io\pytables.py", line 2524, in read _axes values = self.selection.select() File "C:\Python27\lib\site-packages\pandas\io\pytables.py", line 3747, in sele ct return self.table.table.readWhere(self.condition, start=self.start, stop=sel f.stop) File "C:\Python27\lib\site-packages\tables\table.py", line 1453, in readWhere self._where(condition, condvars, start, stop, step) ] File "C:\Python27\lib\site-packages\tables\table.py", line 1405, in _where compiled = self._compileCondition(condition, condvars) File "C:\Python27\lib\site-packages\tables\table.py", line 1284, in _compileCo ndition compiled = compile_condition(condition, typemap, indexedcols, copycols) File "C:\Python27\lib\site-packages\tables\conditions.py", line 396, in compil e_condition func = NumExpr(expr, signature, copy_args=copycols) File "C:\Python27\lib\site-packages\numexpr\necompiler.py", line 552, in NumEx pr context = getContext(kwargs, frame_depth=1) File "C:\Python27\lib\site-packages\numexpr\necompiler.py", line 473, in getCo ntext raise ValueError("Unknown keyword argument '%s'" % d.popitem()[0]) ValueError: Unknown keyword argument 'copy_args'

ERROR: test_select_with_many_inputs (pandas.io.tests.test_pytables.TestHDFStore)

---

Traceback (most recent call last): File "C:\Python27\lib\site-packages\pandas\io\tests\test_pytables.py", line 20 86, in test_select_with_many_inputs result = store.select('df', [Term('ts', '>=', Timestamp('2012-02-01'))]) File "C:\Python27\lib\site-packages\pandas\io\pytables.py", line 458, in selec t return TableIterator(self, func, nrows=s.nrows, start=start, stop=stop, auto _close=auto_close).get_values() File "C:\Python27\lib\site-packages\pandas\io\pytables.py", line 984, in get_v alues results = self.func(self.start, self.stop) File "C:\Python27\lib\site-packages\pandas\io\pytables.py", line 451, in func return s.read(where=where, start=_start, stop=_stop, columns=columns, **kwar gs) File "C:\Python27\lib\site-packages\pandas\io\pytables.py", line 3153, in read

if not self.read_axes(where=where, **kwargs): File "C:\Python27\lib\site-packages\pandas\io\pytables.py", line 2524, in read _axes values = self.selection.select() File "C:\Python27\lib\site-packages\pandas\io\pytables.py", line 3747, in sele ct return self.table.table.readWhere(self.condition, start=self.start, stop=sel f.stop) File "C:\Python27\lib\site-packages\tables\table.py", line 1453, in readWhere self._where(condition, condvars, start, stop, step) ] File "C:\Python27\lib\site-packages\tables\table.py", line 1405, in _where compiled = self._compileCondition(condition, condvars) File "C:\Python27\lib\site-packages\tables\table.py", line 1284, in _compileCo ndition compiled = compile_condition(condition, typemap, indexedcols, copycols) File "C:\Python27\lib\site-packages\tables\conditions.py", line 396, in compil e_condition func = NumExpr(expr, signature, copy_args=copycols) File "C:\Python27\lib\site-packages\numexpr\necompiler.py", line 552, in NumEx pr context = getContext(kwargs, frame_depth=1) File "C:\Python27\lib\site-packages\numexpr\necompiler.py", line 473, in getCo ntext raise ValueError("Unknown keyword argument '%s'" % d.popitem()[0]) ValueError: Unknown keyword argument 'copy_args'

ERROR: test_string_select (pandas.io.tests.test_pytables.TestHDFStore)

Traceback (most recent call last): File "C:\Python27\lib\site-packages\pandas\io\tests\test_pytables.py", line 23 23, in test_string_select result = store.select('df',Term('x=none')) File "C:\Python27\lib\site-packages\pandas\io\pytables.py", line 458, in selec t return TableIterator(self, func, nrows=s.nrows, start=start, stop=stop, auto _close=auto_close).get_values() File "C:\Python27\lib\site-packages\pandas\io\pytables.py", line 984, in get_v alues results = self.func(self.start, self.stop) File "C:\Python27\lib\site-packages\pandas\io\pytables.py", line 451, in func return s.read(where=where, start=_start, stop=_stop, columns=columns, **kwar gs) File "C:\Python27\lib\site-packages\pandas\io\pytables.py", line 3153, in read

if not self.read_axes(where=where, **kwargs):

File "C:\Python27\lib\site-packages\pandas\io\pytables.py", line 2524, in read _axes values = self.selection.select() File "C:\Python27\lib\site-packages\pandas\io\pytables.py", line 3747, in sele ct return self.table.table.readWhere(self.condition, start=self.start, stop=sel f.stop) File "C:\Python27\lib\site-packages\tables\table.py", line 1453, in readWhere self._where(condition, condvars, start, stop, step) ] File "C:\Python27\lib\site-packages\tables\table.py", line 1405, in _where compiled = self._compileCondition(condition, condvars) File "C:\Python27\lib\site-packages\tables\table.py", line 1284, in _compileCo ndition compiled = compile_condition(condition, typemap, indexedcols, copycols) File "C:\Python27\lib\site-packages\tables\conditions.py", line 396, in compil e_condition func = NumExpr(expr, signature, copy_args=copycols) File "C:\Python27\lib\site-packages\numexpr\necompiler.py", line 552, in NumEx pr context = getContext(kwargs, frame_depth=1) File "C:\Python27\lib\site-packages\numexpr\necompiler.py", line 473, in getCo ntext raise ValueError("Unknown keyword argument '%s'" % d.popitem()[0]) ValueError: Unknown keyword argument 'copy_args'

ERROR: test_table_append_with_timezones (pandas.io.tests.test_pytables.TestHDFSt

ore)

Traceback (most recent call last): File "C:\Python27\lib\site-packages\pandas\io\tests\test_pytables.py", line 13 62, in test_table_append_with_timezones compare(store.select('df_tz',where=Term('A','>=',df.A[3])),df[df.A>=df.A[3]] ) File "C:\Python27\lib\site-packages\pandas\io\pytables.py", line 458, in selec t return TableIterator(self, func, nrows=s.nrows, start=start, stop=stop, auto _close=auto_close).get_values() File "C:\Python27\lib\site-packages\pandas\io\pytables.py", line 984, in get_v alues results = self.func(self.start, self.stop) File "C:\Python27\lib\site-packages\pandas\io\pytables.py", line 451, in func return s.read(where=where, start=_start, stop=_stop, columns=columns, **kwar gs) File "C:\Python27\lib\site-packages\pandas\io\pytables.py", line 3153, in read

if not self.read_axes(where=where, **kwargs):

File "C:\Python27\lib\site-packages\pandas\io\pytables.py", line 2524, in read _axes values = self.selection.select() File "C:\Python27\lib\site-packages\pandas\io\pytables.py", line 3747, in sele ct return self.table.table.readWhere(self.condition, start=self.start, stop=sel f.stop) File "C:\Python27\lib\site-packages\tables\table.py", line 1453, in readWhere self._where(condition, condvars, start, stop, step) ] File "C:\Python27\lib\site-packages\tables\table.py", line 1405, in _where compiled = self._compileCondition(condition, condvars) File "C:\Python27\lib\site-packages\tables\table.py", line 1284, in _compileCo ndition compiled = compile_condition(condition, typemap, indexedcols, copycols) File "C:\Python27\lib\site-packages\tables\conditions.py", line 396, in compil e_condition func = NumExpr(expr, signature, copy_args=copycols) File "C:\Python27\lib\site-packages\numexpr\necompiler.py", line 552, in NumEx pr context = getContext(kwargs, frame_depth=1) File "C:\Python27\lib\site-packages\numexpr\necompiler.py", line 473, in getCo ntext raise ValueError("Unknown keyword argument '%s'" % d.popitem()[0]) ValueError: Unknown keyword argument 'copy_args'

ERROR: test_terms (pandas.io.tests.test_pytables.TestHDFStore)

Traceback (most recent call last): File "C:\Python27\lib\site-packages\pandas\io\tests\test_pytables.py", line 15 67, in test_terms 'major_axis<20000108'), Term('minor_axis', '=', ['A', 'B'])]) File "C:\Python27\lib\site-packages\pandas\io\pytables.py", line 458, in selec t return TableIterator(self, func, nrows=s.nrows, start=start, stop=stop, auto _close=auto_close).get_values() File "C:\Python27\lib\site-packages\pandas\io\pytables.py", line 984, in get_v alues results = self.func(self.start, self.stop) File "C:\Python27\lib\site-packages\pandas\io\pytables.py", line 451, in func return s.read(where=where, start=_start, stop=_stop, columns=columns, **kwar gs) File "C:\Python27\lib\site-packages\pandas\io\pytables.py", line 2875, in read

if not self.read_axes(where=where, **kwargs):

File "C:\Python27\lib\site-packages\pandas\io\pytables.py", line 2524, in read _axes values = self.selection.select() File "C:\Python27\lib\site-packages\pandas\io\pytables.py", line 3747, in sele ct return self.table.table.readWhere(self.condition, start=self.start, stop=sel f.stop) File "C:\Python27\lib\site-packages\tables\table.py", line 1453, in readWhere self._where(condition, condvars, start, stop, step) ] File "C:\Python27\lib\site-packages\tables\table.py", line 1405, in _where compiled = self._compileCondition(condition, condvars) File "C:\Python27\lib\site-packages\tables\table.py", line 1284, in _compileCo ndition compiled = compile_condition(condition, typemap, indexedcols, copycols) File "C:\Python27\lib\site-packages\tables\conditions.py", line 396, in compil e_condition func = NumExpr(expr, signature, copy_args=copycols) File "C:\Python27\lib\site-packages\numexpr\necompiler.py", line 552, in NumEx pr context = getContext(kwargs, frame_depth=1) File "C:\Python27\lib\site-packages\numexpr\necompiler.py", line 473, in getCo ntext raise ValueError("Unknown keyword argument '%s'" % d.popitem()[0]) ValueError: Unknown keyword argument 'copy_args'

FAIL: Throws an exception when DataReader can't get a 200 response from

Traceback (most recent call last): File "C:\Python27\lib\site-packages\pandas\util\testing.py", line 765, in netw ork_wrapper return t(_args, *_kwargs) File "C:\Python27\lib\site-packages\pandas\io\tests\test_data.py", line 370, i n test_fred 15984.1) AssertionError: DATE 2013-01-01 16535.3 Name: GDP, dtype: float64 != 15984.1

FAIL: test_bar_log (pandas.tests.test_graphics.TestDataFramePlots)

Traceback (most recent call last): File "C:\Python27\lib\site-packages\pandas\tests\test_graphics.py", line 504, in test_bar_log self.assertEqual(ax.yaxis.get_ticklocs()[0], 1.0) AssertionError: 0.10000000000000001 != 1.0

---

Ran 3661 tests in 190.758s

FAILED (SKIP=136, errors=18, failures=2)

[jreback]

show pandas/ci/print_versions()

[bluefir]

I don't have ci folder, remember? :-)

[bluefir]

The answer is numexpr 2.2.1. I reverted back to 2.1 and the errors went away.

[cpcloud]

The plotting stuff has nothing to do with numexpr so that can't have solved the problem entirely

[jreback]

@cpcloud looks like 2.2.1 just came out, and of course changed stuff which breaks older PyTables......

https://code.google.com/p/numexpr/wiki/ReleaseNotes

[jreback]

@bluefir

when this error happend, you were running: py2.7, ne 2.2.1, and what version of PyTables?

[bluefir]

2.4.0

[jreback]

@bluefir thanks....was a API breaking change on numexpr....dumb what they did..keep at 2.1!

[cpcloud]

@bluefir sorry about this ... very annoying .. i've raised an issue over at numexpr

https://code.google.com/p/numexpr/issues/detail?id=115

[bluefir]

No need to apologize! Especially since it's not your fault. You guys do a great job and are very responsive. Things like this will happen every once in a while. Are you going to adjust to numexpr 2.2.1 for 0.13 release or is switching to the new numexpr version totally useless?

[jreback]

put up a big fat warning.....recommend for now you DONt upgrade beyond 2.1

http://pandas.pydata.org/pandas-docs/dev/install.html#recommended-dependencies