th0ma7
commented
7 months ago Associated PR (although code is in my local tree) https://github.com/SynoCommunity/spksrc/pull/6040
Closed th0ma7 closed 7 months ago
th0ma7
commented
7 months ago Associated PR (although code is in my local tree) https://github.com/SynoCommunity/spksrc/pull/6040
lithomas1
commented
7 months ago Can you provide your build command?
Looking at the error, you are missing the meson/meson-python dependencies.
th0ma7
commented
7 months ago Indeed it was missing, thnx now added:
make[3]: Entering directory '/home/spksrc/py311-update/spksrc/spk/homeassistant'
===> _PYTHON_HOST_PLATFORM=x86_64-pc-linux-gnu /home/spksrc/py311-update/spksrc/spk/python311/work-x64-7.1/crossenv/cross/bin/pip wheel --disable-pip-version-check --no-binary :all: --find-links /home/spksrc/py311-update/spksrc/spk/homeassistant/../../distrib/pip --cache-dir /home/spksrc/py311-update/spksrc/spk/homeassistant/work-x64-7.1/pip --no-deps --wheel-dir /home/spksrc/py311-update/spksrc/spk/homeassistant/work-x64-7.1/wheelhouse --no-index --no-clean --config-settings=editable-verbose=true --no-build-isolation pandas==2.2.1
Looking in links: /home/spksrc/py311-update/spksrc/spk/homeassistant/../../distrib/pip
Processing /home/spksrc/py311-update/spksrc/distrib/pip/pandas-2.2.1.tar.gz
Preparing metadata (pyproject.toml): started
Preparing metadata (pyproject.toml): finished with status 'error'
error: subprocess-exited-with-error
× Preparing metadata (pyproject.toml) did not run successfully.
│ exit code: 1
╰─> [10 lines of output]
+ meson setup /tmp/pip-wheel-8eh27d9c/pandas_598e5b7c95ba46e28cbfac20f70c52d9 /tmp/pip-wheel-8eh27d9c/pandas_598e5b7c95ba46e28cbfac20f70c52d9/.mesonpy-y9035jpi -Dbuildtype=release -Db_ndebug=if-release -Db_vscrt=md --vsenv --native-file=/tmp/pip-wheel-8eh27d9c/pandas_598e5b7c95ba46e28cbfac20f70c52d9/.mesonpy-y9035jpi/meson-python-native-file.ini
The Meson build system
Version: 1.4.0
Source dir: /tmp/pip-wheel-8eh27d9c/pandas_598e5b7c95ba46e28cbfac20f70c52d9
Build dir: /tmp/pip-wheel-8eh27d9c/pandas_598e5b7c95ba46e28cbfac20f70c52d9/.mesonpy-y9035jpi
Build type: native build
../meson.build:5:13: ERROR: Command `/home/spksrc/py311-update/spksrc/spk/python311/work-x64-7.1/crossenv/cross/bin/python /tmp/pip-wheel-8eh27d9c/pandas_598e5b7c95ba46e28cbfac20f70c52d9/generate_version.py --print` failed with status 1.
A full log can be found at /tmp/pip-wheel-8eh27d9c/pandas_598e5b7c95ba46e28cbfac20f70c52d9/.mesonpy-y9035jpi/meson-logs/meson-log.txt
[end of output]
note: This error originates from a subprocess, and is likely not a problem with pip.
error: metadata-generation-failed
× Encountered error while generating package metadata.
╰─> See above for output.
note: This is an issue with the package mentioned above, not pip.
hint: See above for details.So from here I now added --no-clean to pip but still the meson-log.txt gets deleted. Actually the whole .meson-* is deleted from the temporary folder. Any arguments I can pass at pip build time so meson's files do not get deleted?
th0ma7
commented
7 months ago I was able to keep the log file by setting-up the build directory: --config-settings=builddir=build
Build started at 2024-03-23T13:48:57.608601
Main binary: /home/spksrc/py311-update/spksrc/spk/python311/work-x64-7.1/crossenv/cross/bin/python
Build Options: -Dbuildtype=release -Db_ndebug=if-release -Db_vscrt=md -Dvsenv=True --cross-file=/home/spksrc/py311-update/
spksrc/spk/homeassistant/work-x64-7.1/tc_vars.meson --native-file=/tmp/pip-wheel-s1xttpye/pandas_2f0e7fd58d5b45ebaf8fb7d83
edf1917/build/meson-python-native-file.ini
Python system: Linux
The Meson build system
Version: 1.4.0
Source dir: /tmp/pip-wheel-s1xttpye/pandas_2f0e7fd58d5b45ebaf8fb7d83edf1917
Build dir: /tmp/pip-wheel-s1xttpye/pandas_2f0e7fd58d5b45ebaf8fb7d83edf1917/build
Build type: cross build
Running command: /home/spksrc/py311-update/spksrc/spk/python311/work-x64-7.1/crossenv/cross/bin/python /tmp/pip-wheel-s1xt
tpye/pandas_2f0e7fd58d5b45ebaf8fb7d83edf1917/generate_version.py --print
--- stdout ---
--- stderr ---
Traceback (most recent call last):
File "/tmp/pip-wheel-s1xttpye/pandas_2f0e7fd58d5b45ebaf8fb7d83edf1917/generate_version.py", line 8, in <module>
import versioneer
ModuleNotFoundError: No module named 'versioneer'
../meson.build:5:13: ERROR: Command `/home/spksrc/py311-update/spksrc/spk/python311/work-x64-7.1/crossenv/cross/bin/python
/tmp/pip-wheel-s1xttpye/pandas_2f0e7fd58d5b45ebaf8fb7d83edf1917/generate_version.py --print` failed with status 1.Now added versioneer to my crossenv, with the following result (progress I guess):
EDIT: Note that I found curious the Visual Studio environment message.
===> _PYTHON_HOST_PLATFORM=x86_64-pc-linux-gnu /home/spksrc/py311-update/spksrc/spk/python311/work-x64-7.1/crossenv/cross/bin/pip wheel --disable-pip-version-check --no-binary :all: --find-links /home/spksrc/py311-update/spksrc/spk/homeassistant/../../distrib/pip --cache-dir /home/spksrc/py311-update/spksrc/spk/homeassistant/work-x64-7.1/pip --no-deps --wheel-dir /home/spksrc/py311-update/spksrc/spk/homeassistant/work-x64-7.1/wheelhouse --no-index --no-clean --config-settings=builddir=build --config-settings=editable-verbose=true --config-settings=setup-args=--cross-file=/home/spksrc/py311-update/spksrc/spk/homeassistant/work-x64-7.1/tc_vars.meson --no-build-isolation pandas==2.2.1
Looking in links: /home/spksrc/py311-update/spksrc/spk/homeassistant/../../distrib/pip
Processing /home/spksrc/py311-update/spksrc/distrib/pip/pandas-2.2.1.tar.gz
Preparing metadata (pyproject.toml): started
Preparing metadata (pyproject.toml): finished with status 'error'
error: subprocess-exited-with-error
× Preparing metadata (pyproject.toml) did not run successfully.
│ exit code: 1
╰─> [117 lines of output]
+ meson setup /tmp/pip-wheel-cpma2d0r/pandas_1745047ec6b24424b3bcdf2679ac0287 /tmp/pip-wheel-cpma2d0r/pandas_1745047ec6b24424b3bcdf2679ac0287/build -Dbuildtype=release -Db_ndebug=if-release -Db_vscrt=md --vsenv --cross-file=/home/spksrc/py311-update/spksrc/spk/homeassistant/work-x64-7.1/tc_vars.meson --native-file=/tmp/pip-wheel-cpma2d0r/pandas_1745047ec6b24424b3bcdf2679ac0287/build/meson-python-native-file.ini
The Meson build system
Version: 1.4.0
Source dir: /tmp/pip-wheel-cpma2d0r/pandas_1745047ec6b24424b3bcdf2679ac0287
Build dir: /tmp/pip-wheel-cpma2d0r/pandas_1745047ec6b24424b3bcdf2679ac0287/build
Build type: cross build
Project name: pandas
Project version: 2.2.1
C compiler for the host machine: /home/spksrc/py311-update/spksrc/toolchain/syno-x64-7.1/work/x86_64-pc-linux-gnu/bin/x86_64-pc-linux-gnu-gcc (gcc 8.5.0 "x86_64-pc-linux-gnu-gcc (GCC) 8.5.0")
C linker for the host machine: /home/spksrc/py311-update/spksrc/toolchain/syno-x64-7.1/work/x86_64-pc-linux-gnu/bin/x86_64-pc-linux-gnu-gcc ld.bfd 2.30
C++ compiler for the host machine: /home/spksrc/py311-update/spksrc/toolchain/syno-x64-7.1/work/x86_64-pc-linux-gnu/bin/x86_64-pc-linux-gnu-g++ (gcc 8.5.0 "x86_64-pc-linux-gnu-g++ (GCC) 8.5.0")
C++ linker for the host machine: /home/spksrc/py311-update/spksrc/toolchain/syno-x64-7.1/work/x86_64-pc-linux-gnu/bin/x86_64-pc-linux-gnu-g++ ld.bfd 2.30
Cython compiler for the host machine: cython (cython 0.29.37)
C compiler for the build machine: cc (gcc 10.2.1 "cc (Debian 10.2.1-6) 10.2.1 20210110")
C linker for the build machine: cc ld.bfd 2.35.2
C++ compiler for the build machine: c++ (gcc 10.2.1 "c++ (Debian 10.2.1-6) 10.2.1 20210110")
C++ linker for the build machine: c++ ld.bfd 2.35.2
Cython compiler for the build machine: cython (cython 0.29.37)
Build machine cpu family: x86_64
Build machine cpu: x86_64
Host machine cpu family: x86_64
Host machine cpu: x86_64
Target machine cpu family: x86_64
Target machine cpu: x86_64
Program python3 found: YES (/home/spksrc/py311-update/spksrc/spk/python311/work-x64-7.1/crossenv/cross/bin/python)
Found pkg-config: NO
Run-time dependency python found: YES 3.11
Build targets in project: 53
pandas 2.2.1
User defined options
Cross files : /home/spksrc/py311-update/spksrc/spk/homeassistant/work-x64-7.1/tc_vars.meson
Native files: /tmp/pip-wheel-cpma2d0r/pandas_1745047ec6b24424b3bcdf2679ac0287/build/meson-python-native-file.ini
buildtype : release
vsenv : true
b_ndebug : if-release
b_vscrt : md
Found ninja-1.10.1 at /usr/bin/ninja
Visual Studio environment is needed to run Ninja. It is recommended to use Meson wrapper:
/home/spksrc/py311-update/spksrc/spk/python311/work-x64-7.1/crossenv/cross/bin/meson compile -C .
+ /usr/bin/ninja
[1/151] Generating pandas/_libs/khash_primitive_helper_pxi with a custom command
[2/151] Generating pandas/_libs/algos_common_helper_pxi with a custom command
[3/151] Generating pandas/_libs/intervaltree_helper_pxi with a custom command
[4/151] Generating pandas/_libs/sparse_op_helper_pxi with a custom command
[5/151] Generating pandas/_libs/hashtable_class_helper_pxi with a custom command
[6/151] Generating pandas/_libs/algos_take_helper_pxi with a custom command
[7/151] Copying file pandas/__init__.py
[8/151] Generating pandas/_libs/hashtable_func_helper_pxi with a custom command
[9/151] Generating pandas/_libs/index_class_helper_pxi with a custom command
[10/151] Compiling Cython source /tmp/pip-wheel-cpma2d0r/pandas_1745047ec6b24424b3bcdf2679ac0287/pandas/_libs/tslibs/base.pyx
[11/151] Compiling C object pandas/_libs/tslibs/parsing.cpython-311-x86_64-linux-gnu.so.p/.._src_parser_tokenizer.c.o
[12/151] Compiling Cython source /tmp/pip-wheel-cpma2d0r/pandas_1745047ec6b24424b3bcdf2679ac0287/pandas/_libs/tslibs/ccalendar.pyx
[13/151] Compiling Cython source /tmp/pip-wheel-cpma2d0r/pandas_1745047ec6b24424b3bcdf2679ac0287/pandas/_libs/tslibs/dtypes.pyx
[14/151] Compiling Cython source /tmp/pip-wheel-cpma2d0r/pandas_1745047ec6b24424b3bcdf2679ac0287/pandas/_libs/tslibs/np_datetime.pyx
[15/151] Compiling Cython source /tmp/pip-wheel-cpma2d0r/pandas_1745047ec6b24424b3bcdf2679ac0287/pandas/_libs/tslibs/nattype.pyx
[16/151] Compiling C object pandas/_libs/tslibs/base.cpython-311-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_tslibs_base.pyx.c.o
[17/151] Linking target pandas/_libs/tslibs/base.cpython-311-x86_64-linux-gnu.so
[18/151] Compiling Cython source /tmp/pip-wheel-cpma2d0r/pandas_1745047ec6b24424b3bcdf2679ac0287/pandas/_libs/tslibs/conversion.pyx
[19/151] Compiling Cython source /tmp/pip-wheel-cpma2d0r/pandas_1745047ec6b24424b3bcdf2679ac0287/pandas/_libs/tslibs/fields.pyx
[20/151] Compiling Cython source /tmp/pip-wheel-cpma2d0r/pandas_1745047ec6b24424b3bcdf2679ac0287/pandas/_libs/tslibs/strptime.pyx
[21/151] Compiling Cython source /tmp/pip-wheel-cpma2d0r/pandas_1745047ec6b24424b3bcdf2679ac0287/pandas/_libs/tslibs/parsing.pyx
[22/151] Compiling Cython source /tmp/pip-wheel-cpma2d0r/pandas_1745047ec6b24424b3bcdf2679ac0287/pandas/_libs/tslibs/offsets.pyx
[23/151] Compiling C object pandas/_libs/tslibs/ccalendar.cpython-311-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_tslibs_ccalendar.pyx.c.o
[24/151] Linking target pandas/_libs/tslibs/ccalendar.cpython-311-x86_64-linux-gnu.so
[25/151] Compiling Cython source /tmp/pip-wheel-cpma2d0r/pandas_1745047ec6b24424b3bcdf2679ac0287/pandas/_libs/tslibs/timestamps.pyx
[26/151] Compiling Cython source /tmp/pip-wheel-cpma2d0r/pandas_1745047ec6b24424b3bcdf2679ac0287/pandas/_libs/tslibs/timedeltas.pyx
[27/151] Compiling Cython source /tmp/pip-wheel-cpma2d0r/pandas_1745047ec6b24424b3bcdf2679ac0287/pandas/_libs/tslibs/timezones.pyx
[28/151] Compiling Cython source /tmp/pip-wheel-cpma2d0r/pandas_1745047ec6b24424b3bcdf2679ac0287/pandas/_libs/tslibs/period.pyx
[29/151] Compiling Cython source /tmp/pip-wheel-cpma2d0r/pandas_1745047ec6b24424b3bcdf2679ac0287/pandas/_libs/tslibs/tzconversion.pyx
[30/151] Compiling C object pandas/_libs/tslibs/np_datetime.cpython-311-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_tslibs_np_datetime.pyx.c.o
[31/151] Linking target pandas/_libs/tslibs/np_datetime.cpython-311-x86_64-linux-gnu.so
[32/151] Compiling C object pandas/_libs/tslibs/dtypes.cpython-311-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_tslibs_dtypes.pyx.c.o
[33/151] Linking target pandas/_libs/tslibs/dtypes.cpython-311-x86_64-linux-gnu.so
[34/151] Compiling Cython source /tmp/pip-wheel-cpma2d0r/pandas_1745047ec6b24424b3bcdf2679ac0287/pandas/_libs/algos.pyx
FAILED: pandas/_libs/algos.cpython-311-x86_64-linux-gnu.so.p/pandas/_libs/algos.pyx.c
cython -M --fast-fail -3 --include-dir /tmp/pip-wheel-cpma2d0r/pandas_1745047ec6b24424b3bcdf2679ac0287/build/pandas/_libs '-X always_allow_keywords=true' /tmp/pip-wheel-cpma2d0r/pandas_1745047ec6b24424b3bcdf2679ac0287/pandas/_libs/algos.pyx -o pandas/_libs/algos.cpython-311-x86_64-linux-gnu.so.p/pandas/_libs/algos.pyx.c
Error compiling Cython file:
------------------------------------------------------------
...
# each incremental i value can be looked up in the lexsort_indexer
# array that we sorted previously, which gives us the location of
# that sorted value for retrieval back from the original
# values / masked_vals arrays
# TODO(cython3): de-duplicate once cython supports conditional nogil
with gil(numeric_object_t is object):
^
------------------------------------------------------------
/tmp/pip-wheel-cpma2d0r/pandas_1745047ec6b24424b3bcdf2679ac0287/pandas/_libs/algos.pyx:1147:12: Expected ':', found '('
[35/151] Compiling Cython source /tmp/pip-wheel-cpma2d0r/pandas_1745047ec6b24424b3bcdf2679ac0287/pandas/_libs/tslibs/vectorized.pyx
[36/151] Compiling C object pandas/_libs/tslibs/nattype.cpython-311-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_tslibs_nattype.pyx.c.o
[37/151] Compiling Cython source /tmp/pip-wheel-cpma2d0r/pandas_1745047ec6b24424b3bcdf2679ac0287/pandas/_libs/arrays.pyx
[38/151] Compiling C object pandas/_libs/tslibs/conversion.cpython-311-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_tslibs_conversion.pyx.c.o
pandas/_libs/tslibs/conversion.cpython-311-x86_64-linux-gnu.so.p/pandas/_libs/tslibs/conversion.pyx.c: In function ‘__pyx_pf_6pandas_5_libs_6tslibs_10conversion_cast_from_unit_vectorized.isra.48’:
pandas/_libs/tslibs/conversion.cpython-311-x86_64-linux-gnu.so.p/pandas/_libs/tslibs/conversion.pyx.c:2398:79: warning: ‘__pyx_v_i’ may be used uninitialized in this function [-Wmaybe-uninitialized]
__Pyx_GetItemInt_Fast(o, (Py_ssize_t)i, is_list, wraparound, boundscheck) :\
^~
(is_list ? (PyErr_SetString(PyExc_IndexError, "list index out of range"), (PyObject*)NULL) :\
pandas/_libs/tslibs/conversion.cpython-311-x86_64-linux-gnu.so.p/pandas/_libs/tslibs/conversion.pyx.c:3853:14: note: ‘__pyx_v_i’ was declared here
Py_ssize_t __pyx_v_i;
^~~~~~~~~
[39/151] Compiling C object pandas/_libs/tslibs/timezones.cpython-311-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_tslibs_timezones.pyx.c.o
[40/151] Compiling C object pandas/_libs/tslibs/fields.cpython-311-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_tslibs_fields.pyx.c.o
[41/151] Compiling C object pandas/_libs/tslibs/parsing.cpython-311-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_tslibs_parsing.pyx.c.o
[42/151] Compiling C object pandas/_libs/tslibs/tzconversion.cpython-311-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_tslibs_tzconversion.pyx.c.o
[43/151] Compiling C object pandas/_libs/tslibs/strptime.cpython-311-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_tslibs_strptime.pyx.c.o
[44/151] Compiling C object pandas/_libs/tslibs/period.cpython-311-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_tslibs_period.pyx.c.o
[45/151] Compiling C object pandas/_libs/tslibs/timestamps.cpython-311-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_tslibs_timestamps.pyx.c.o
[46/151] Compiling C object pandas/_libs/tslibs/timedeltas.cpython-311-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_tslibs_timedeltas.pyx.c.o
[47/151] Compiling C object pandas/_libs/tslibs/offsets.cpython-311-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_tslibs_offsets.pyx.c.o
ninja: build stopped: subcommand failed.
[end of output]
note: This error originates from a subprocess, and is likely not a problem with pip.
error: metadata-generation-failed
× Encountered error while generating package metadata.
╰─> See above for output.
note: This is an issue with the package mentioned above, not pip.
hint: See above for details.
make[3]: *** [../../mk/spksrc.wheel.mk:203: cross-compile-wheel-pandas] Error 1
make[3]: Leaving directory '/home/spksrc/py311-update/spksrc/spk/homeassistant'
make[2]: *** [../../mk/spksrc.wheel.mk:144: build_wheel_target] Error 1
make[2]: Leaving directory '/home/spksrc/py311-update/spksrc/spk/homeassistant'
make[1]: *** [../../mk/spksrc.spk.mk:719: build-arch-x64-7.1] Error 1
make[1]: Leaving directory '/home/spksrc/py311-update/spksrc/spk/homeassistant'
make: *** [../../mk/spksrc.spk.mk:713: arch-x64-7.1] Error 2You need Cython 3 to be able to compile pandas. It looks like you have Cython 0.29.37.
lithomas1
commented
7 months ago Going to close as I'm assuming the issue is fixed.
Feel free to comment if you're experiencing any other issues and I'll reopen this.
th0ma7
commented
7 months ago Thnx for the help and I'll reopen if i need further assistance but i believe my concerns are now answered.
Installation check
Platform
Synology toolchain for any (x64, armv7, aarch64, ppc)
Installation Method
Built from source
pandas Version
2.0.3 and 2.2.1
Python Version
3.11.8
Installation Logs