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pangenome / odgi

Optimized Dynamic Genome/Graph Implementation: understanding pangenome graphs
https://doi.org/10.1093/bioinformatics/btac308
MIT License
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non-binary halotype matrix #452

Closed ekg closed 2 years ago

ekg commented 2 years ago

Useful for genotyping segdups / VNTRs.

AndreaGuarracino commented 2 years ago

@ekg, why hasn't it been integrated into the master yet? Maybe, we could keep both ways (binary and non-binary) and put a flag to decide which output to emit?