fatal error: ../include/wfmash_git_version.hpp: No such file or directory

[grenaud]

Hello! I am trying to build the package but I get:

/home/ctools/wfmash/src/version.cpp:10:10: fatal error: ../include/wfmash_git_version.hpp: No such file or directory
   10 | #include "../include/wfmash_git_version.hpp"
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

[ekg]

Is this via the docker build?

On Thu, Jan 6, 2022, 11:12 Gabriel Renaud @.***> wrote:

Hello! I am trying to build the package but I get:

/home/ctools/wfmash/src/version.cpp:10:10: fatal error: ../include/wfmash_git_version.hpp: No such file or directory 10 | #include "../include/wfmash_git_version.hpp" | ^~~~~~~~~~~

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[grenaud]

No via cmake

[AndreaGuarracino]

Could you please report exactly all the instructions/steps you are following? Usually, we suggest users to install pggb with docker or bioconda.

[ekg]

It could be caused by building on a system without git. That file should contain a version string that is pulled from the git tree using the git CLI.

On Thu, Jan 6, 2022, 11:29 Andrea Guarracino @.***> wrote:

Could you please report exactly all the instructions/steps you are following? Usually, we suggest users to install pggb with docker or bioconda.

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[grenaud]

thank you for your quick answers! I did:

git clone https://github.com/ekg/wfmash.git cd wfmash/ mkdir build cd build/ cmake .. make -j 10

[ekg]

Looks like it could be a build dependency issue? That file should be created.

On Thu, Jan 6, 2022, 11:57 Gabriel Renaud @.***> wrote:

thank you for your quick answers! I did:

git clone https://github.com/ekg/wfmash.git cd wfmash/ mkdir build cd build/ cmake .. make -j 10

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[grenaud]

Ok I fixed it by changing: execute_process(COMMAND bash scripts/generate_git_version.sh ${CMAKE_SOURCE_DIR}/include) to execute_process(COMMAND bash ../scripts/generate_git_version.sh ${CMAKE_SOURCE_DIR}/include)

[AndreaGuarracino]

@grenaud could you please retry with the current master? It should be fixed now.

[AndreaGuarracino]

Ok I fixed it by changing: execute_process(COMMAND bash scripts/generate_git_version.sh ${CMAKE_SOURCE_DIR}/include) to execute_process(COMMAND bash ../scripts/generate_git_version.sh ${CMAKE_SOURCE_DIR}/include)

Yes, it was exactly a path problem.

[grenaud]

@AndreaGuarracino I realized that I raised the issue on the wrong page. It should be on wfmash.

[AndreaGuarracino]

Do not worry. You would have encountered the same problem in the other components of pggb as well. I'm just fixing them all. Thank you for reporting this issue to us.