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pangenome / pggb

the pangenome graph builder
https://doi.org/10.1038/s41592-024-02430-3
MIT License
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`--temp-dir` for specifying a directory for temporary files #197

Closed AndreaGuarracino closed 2 years ago

AndreaGuarracino commented 2 years ago

This allows users to specify a directory for (big) temporary files other than the output directory.

It still needs a change in seqwish, smoothxg, and odgi to better manage the temporary directory there.