--n-haplotypes option not recognized

pangenome / pggb

the pangenome graph builder

https://doi.org/10.1101/2023.04.05.535718

MIT License

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Closed arunisaac closed 10 months ago

arunisaac commented 10 months ago

The --n-haplotypes option is not recognized.

$ pggb -i in.fasta --n-haplotypes 9 -o output
pggb: unrecognized option '--n-haplotypes'

But, the short -n version of the option works.

$ pggb -i in.fasta -n 9 -o output

AndreaGuarracino commented 10 months ago

It works for me! Which version are you using? I've just tried with

pggb --version
pggb v0.5.4-44-gbccc2ba

arunisaac commented 10 months ago

Indeed, the problem goes away on the latest master. I was on the v0.5.4 release.

Sorry for the noise!