pangshumao / SpineParseNet

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a bug #1

Open XiaoZhang-NN opened 3 years ago

XiaoZhang-NN commented 3 years ago

您好,按照您的数据文件夹排列各个文件夹,一直报错:我已经把文件夹换成我自己的文件夹,并把gz数据放到最后的mr和mask文件夹里了。 step 1: create the h5 dataset for coarse segmentation stage.................................................................... Traceback (most recent call last): File "./datasets/coarse_create_h5.py", line 74, in val_ind=val_ind, test_ind=test_ind) File "<__array_function__ internals>", line 6, in savez File "/home/zhangxiao/anaconda3/envs/qiuqiu_fde/lib/python3.7/site-packages/numpy/lib/npyio.py", line 617, in savez _savez(file, args, kwds, False) File "/home/zhangxiao/anaconda3/envs/qiuqiu_fde/lib/python3.7/site-packages/numpy/lib/npyio.py", line 713, in _savez zipf = zipfile_factory(file, mode="w", compression=compression) File "/home/zhangxiao/anaconda3/envs/qiuqiu_fde/lib/python3.7/site-packages/numpy/lib/npyio.py", line 112, in zipfile_factory return zipfile.ZipFile(file, *args, **kwargs) File "/home/zhangxiao/anaconda3/envs/qiuqiu_fde/lib/python3.7/zipfile.py", line 1240, in init self.fp = io.open(file, filemode) FileNotFoundError: [Errno 2] No such file or directory: '/public/data/coarse/split_ind_fold1.npz' step 2: training the DeepLabv3+ model for coarse segmentation stage............................................................

pangshumao commented 3 years ago

你好,main.sh第2行data_root_dir=/public/data得改为你的数据根目录,有问题可以在比赛qq群(854917214)里沟通。

在 2021-04-22 19:55:05,"XiaoZhang-NN" @.***> 写道:

您好,按照您的数据文件夹排列各个文件夹,一直报错:我已经把文件夹换成我自己的文件夹,并把gz数据放到最后的mr和mask文件夹里了。 step 1: create the h5 dataset for coarse segmentation stage.................................................................... Traceback (most recent call last): File "./datasets/coarse_create_h5.py", line 74, in val_ind=val_ind, test_ind=test_ind) File "", line 6, in savez File "/home/zhangxiao/anaconda3/envs/qiuqiu_fde/lib/python3.7/site-packages/numpy/lib/npyio.py", line 617, in savez _savez(file, args, kwds, False) File "/home/zhangxiao/anaconda3/envs/qiuqiu_fde/lib/python3.7/site-packages/numpy/lib/npyio.py", line 713, in _savez zipf = zipfile_factory(file, mode="w", compression=compression) File "/home/zhangxiao/anaconda3/envs/qiuqiu_fde/lib/python3.7/site-packages/numpy/lib/npyio.py", line 112, in zipfile_factory return zipfile.ZipFile(file, *args, **kwargs) File "/home/zhangxiao/anaconda3/envs/qiuqiu_fde/lib/python3.7/zipfile.py", line 1240, in init self.fp = io.open(file, filemode) FileNotFoundError: [Errno 2] No such file or directory: '/public/data/coarse/split_ind_fold1.npz' step 2: training the DeepLabv3+ model for coarse segmentation stage............................................................

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