Hi Mishek
Yass should work relatively well on non-drift in-vivo recordings. So if the animals are anesthetized or not moving much. There's a yass with drift that we're working on , but will take a while longer.
The start parameters should be good, I'd use those until you find otherwise.
I was only able to get about 6 units, while other spike sorters found at least a 100. Any suggestions on what parameters I should adjust for these experiments? I can send the log file from yass if that would help.
Hi Mishek Yass should work relatively well on non-drift in-vivo recordings. So if the animals are anesthetized or not moving much. There's a yass with drift that we're working on , but will take a while longer. The start parameters should be good, I'd use those until you find otherwise.
Originally posted by @catubc in https://github.com/paninski-lab/yass/issues/345#issuecomment-913364472
I was only able to get about 6 units, while other spike sorters found at least a 100. Any suggestions on what parameters I should adjust for these experiments? I can send the log file from yass if that would help.