Open dustine32 opened 2 years ago
Not yet sure where exactly this is breaking but the "double-prefix" MGI is causing the whole ID from being output in the go_aggregate view:
go_aggregate
annotation_id;accession;term;type;evidence_id;evidence;confidence_code;qualifier;creation_date 1019429424;PTHR21180:AN18;GO:0010875;MGI;1353904743;MGI;IMP;;2020-04-28 10:32:01
Here, both type and evidence are "MGI". For PMIDs, the standard is type="PMID" and evidence="12345".
type
evidence
We need to update queries to properly account for an MGI reference's double-prefix, e.g., "MGI:MGI:12345".
Not yet sure where exactly this is breaking but the "double-prefix" MGI is causing the whole ID from being output in the
go_aggregateview:Here, both
typeandevidenceare "MGI". For PMIDs, the standard istype="PMID" andevidence="12345".We need to update queries to properly account for an MGI reference's double-prefix, e.g., "MGI:MGI:12345".