pantherdb / pango_modules

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Determine level one terms #1

Open dustine32 opened 10 months ago

dustine32 commented 10 months ago

This one's for @thomaspd. The spec shows the two levels of module organization in the diagram:

  1. Level 1 corresponds to the top level that determines the color shade.
  2. Level 2 is the GO slim term sub-area within a level 1 area containing module boxes for module terms that are descendants of the level 2 term.

Given the data we currently have (goslim_generic_pt.obo and the BP modules JSON), I can organize the BP modules within the level 2 sub-areas. But I'm a little fuzzy on the exact level 1 terms when looking at the diagram: image

@thomaspd Could you define the exact GO terms for level 1? I'm currently guessing:

Whatever level 1 terms we decide on, I'll version control the list in the repo here.