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paraslonic / GenesTreePipe

having a set of genes find them in a number of genomes, multialign them, build tree for core genes and for each of pan-genes
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strain name #1

Open paraslonic opened 9 years ago

paraslonic commented 9 years ago

In R script makeSeqsFiles.r I use part of a gene name before five digits as a strain name. It`s ok for prokka, but not a general solution.

paraslonic commented 9 years ago

2DO: add strain name check (alphanum)