Can HiNT be used for genomes of other species, like in plants?

parklab / HiNT

HiC for copy Number variation and Translocation detection

MIT License

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Can HiNT be used for genomes of other species, like in plants? #10

Open clementmo opened 4 years ago

clementmo commented 4 years ago

Hi, thank you for your good software. I am studying plant 3D genome. For both HiNT-CNV and HiNT-TL, the parameter --refdir directs to specific human genomes. Does that mean this software can only be applied to hic matrix from human genomes? Can you provide some modifications for other reference genomes? Hope to hear from you. Thank you so much!

Pengcheng