parklab / bamsnap

MIT License
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No html or zip output created with multiple threads #17

Closed alxsimon closed 3 years ago

alxsimon commented 3 years ago

When using the -process option with multiple threads, no html output or zip is created.

For example:

bamsnap -bamlist list_bam.txt -bed batch_sites_50.bed \
-ref ../angsd_calling/resources/ref_genome/mgal_01.fa \
-out ./batch_sites -draw coordinates bamplot coverage base \
-separated_bam -process 4 -zipout
danielmsk commented 3 years ago

I debugged the empty zipout issue, please try 0.2.18 version.

alxsimon commented 3 years ago

Thanks!