parklab / xTea

Comprehensive TE insertion identification with WGS/WES data from multiple sequencing technics
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-f: steps to run. (5907 means run all the steps); #87

Closed axz91 closed 1 year ago

axz91 commented 1 year ago

-f: steps to run. (5907 means run all the steps);

May I know any other options for -F. I am not quiet understand the meaning of 5907

simoncchu commented 1 year ago

It's a combination of running steps. For example, 1 for clip reads, 2 for discordant step, .... This is mainly for developmental debug. 5907 is the right setting.