parmejohn / scRNA-pipeline-UofM

scRNA-seq Pipeline for Drogemoller and Wright Labs
GNU General Public License v3.0
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Perform pathway analysis on the genes in miloR #40

Closed parmejohn closed 3 months ago

parmejohn commented 3 months ago

can do so by taking avg logFC value from the DEG analysis with the neighbors, but some gene sets could be too small to be significant. Review with Britt and Galen whether just to take the top/bottom 10 to get a general idea what the genes are involved in