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worker initialization failed: there is no package called 'RRgeo' #1

Closed accaragao closed 5 days ago

accaragao commented 1 week ago

Hi, In "ENphylo model predictions and mapping.R", when i run the line:

enfa_test<-ENphylo_modeling(input_data=DATA_FULL[k],
                            input_mask=MASK_FULL,
                            tree=tree,
                            obs_col="OBS",
                            time_col="TIME_factor",
                            min_occ_enfa=npoints-1,
                            eval_metric_for_imputation="AUC",
                            output_options = "best",
                            eval_threshold=0.5)

I got the error message: Error in e$fun(obj, substitute(ex), parent.frame(), e$data) : worker initialization failed: there is no package called 'RRgeo'. But I can't find this package in any repository.

Thanks in advance! Ana

pasraia commented 1 week ago

Hi Ana, this issue was fixed a few days ago. You should reinstall the package (which is now v 0.5.6) and find this problem solved. Please notice, the latest versions of RRdtn work with terra/sf insted of raster/sp, and some of the arguments have been grouped together. In your particular case, the object MASK_FULL should be assigned by terra::rast(...) and the arguments eval_metric_for_imputation="AUC", output_options = "best", eval_threshold=0.5 must be supplied to the function as eval.args=list(eval_metric_for_imputation="AUC", output_options = "best", eval_threshold=0.5). Everything new is documented in the help pages of RRdtn 0.5.6. Hope this helps Cheers Pas

accaragao commented 5 days ago

Hi Pas, Thank you for your rapid reply! It works now!