ValueError: setting an array element with a sequence. The requested array has an inhomogeneous shape after 1 dimensions. The detected shape was (1313,) + inhomogeneous part.

patrickbryant1 / Umol

Protein-ligand structure prediction

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ValueError: setting an array element with a sequence. The requested array has an inhomogeneous shape after 1 dimensions. The detected shape was (1313,) + inhomogeneous part. #25

Open sgrigna79 opened 3 weeks ago

sgrigna79 commented 3 weeks ago

I'm trying to use colab to generate a protein ligand complex but I got the error in the title..

ValueError: setting an array element with a sequence. The requested array has an inhomogeneous shape after 1 dimensions. The detected shape was (1313,) + inhomogeneous part.

Any idea about the origin?

Thanks

Jacopo

patrickbryant1 commented 1 week ago

Hi,

This issue generally comes from shape mismatches. Please make sure all sequences in the msa etc are of equal lengths.

Best,

Patrick