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patrickjdanaher / gene-set-DE-explorer

gene set guided plotting for differential expression analyses
MIT License
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need at least one gene set file included with the package #2

Open patrickjdanaher opened 5 years ago

patrickjdanaher commented 5 years ago

The MSigDB KEGG sets would be a good start. Should be stored in /data as a .RData file. Could also store as a .csv for the purpose of testing the gene set parser code and for example purposes.

patrickjdanaher commented 5 years ago

Actually, gene set files will be tab-delimited, following the standard of MSigDB.