mgnkrr commented 1 year ago

When I run the first cell in the first example notebook, I get the following error output:

ImportError Traceback (most recent call last) Cell In[1], line 3 1 import numpy as np 2 import pandas as pd ----> 3 from plateflex import Grid

File ~\Anaconda3\envs\pflex\lib\site-packages\plateflex__init__.py:157 155 # -- coding: utf-8 -- 156 from . import conf as cf --> 157 from . import estimate 158 from . import plotting 159 from .classes import Grid, TopoGrid, GravGrid, BougGrid, FairGrid

File ~\Anaconda3\envs\pflex\lib\site-packages\plateflex\estimate.py:57 55 import numpy as np 56 import pymc3 as pm ---> 57 from plateflex.flex import flex 58 from plateflex import conf as cf 59 from theano.compile.ops import as_op

ImportError: DLL load failed while importing flex: The specified module could not be found.

Can you help me with this? Thank you!

paudetseis commented 1 year ago

Hi @mgnkrr , It looks like PlateFlex did not install properly, if you cannot load the Grid module from it. From your conda environment, what happens if you do import plateflex?

If this returns an error, I will need to know how you installed the code and if there were any error messages during compilation. You could do a screen capture and post them here. You could also look into the other issues reported on GitHub, and perhaps the answer has been provided before.

mgnkrr commented 1 year ago

Hi Dr. Audet,

Thanks so much for your quick reply. Here's the error I get when I run import plateflex:

Traceback (most recent call last):
  File "<stdin>", line 1, in <module>
  File "C:\Users\mk44584\PlateFlex\plateflex\__init__.py", line 157, in <module>
    from . import estimate
  File "C:\Users\mk44584\PlateFlex\plateflex\estimate.py", line 57, in <module>
    from plateflex.flex import flex
ModuleNotFoundError: No module named 'plateflex.flex'

I installed the code using the following:

conda create -n pflex python=3.8 fortran-compiler numpy=1.21.2 pymc3=3.10.0 matplotlib=3.4.3 seaborn=0.11.2 scikit-image=0.18.3 pandas=1.3.2 -c conda-forge
conda activate pflex
git clone https://github.com/paudetseis/PlateFlex.git
cd PlateFlex
pip install .

I had a few errors during compilation, but I was able to fix them by installing different versions of various packages. Here's the output from conda list: pflex_conda_list.txt

Thanks again for your help.

paudetseis commented 1 year ago

Hi @mgnkrr and @super-xl This problem likely arises because of problems during compilation of the fortran code packaged with PlateFlex. Can you share the output of your terminal when you install the code, specifically the output of the command pip install .. A screen capture would be most helpful. Please also let me know which OS you are working under (e.g., MacOS, Ubuntu, Windows, etc.) and its version.

LiXiong0906 commented 1 year ago

Hi @paudetseis Thanks so much for your quick reply. I'm working under Windows 10. (pflex1) C:\Users\admin\Desktop\PlateFlex-master>pip install . Processing c:\users\admin\desktop\plateflex-master Preparing metadata (setup.py) ... done Requirement already satisfied: numpy>=1.15 in d:\anaconda3\envs\pflex1\lib\site-packages (from plateflex==0.1.0) (1.21.2) Requirement already satisfied: pymc3 in d:\anaconda3\envs\pflex1\lib\site-packages (from plateflex==0.1.0) (3.10.0) Requirement already satisfied: matplotlib in d:\anaconda3\envs\pflex1\lib\site-packages (from plateflex==0.1.0) (3.4.3) Requirement already satisfied: seaborn in d:\anaconda3\envs\pflex1\lib\site-packages (from plateflex==0.1.0) (0.11.2) Requirement already satisfied: cycler>=0.10 in d:\anaconda3\envs\pflex1\lib\site-packages (from matplotlib->plateflex==0.1.0) (0.11.0) Requirement already satisfied: kiwisolver>=1.0.1 in d:\anaconda3\envs\pflex1\lib\site-packages (from matplotlib->plateflex==0.1.0) (1.4.4) Requirement already satisfied: pillow>=6.2.0 in d:\anaconda3\envs\pflex1\lib\site-packages (from matplotlib->plateflex==0.1.0) (9.5.0) Requirement already satisfied: pyparsing>=2.2.1 in d:\anaconda3\envs\pflex1\lib\site-packages (from matplotlib->plateflex==0.1.0) (3.0.9) Requirement already satisfied: python-dateutil>=2.7 in d:\anaconda3\envs\pflex1\lib\site-packages (from matplotlib->plateflex==0.1.0) (2.8.2) Requirement already satisfied: arviz>=0.9.0 in d:\anaconda3\envs\pflex1\lib\site-packages (from pymc3->plateflex==0.1.0) (0.11.1) Requirement already satisfied: theano-pymc==1.0.11 in d:\anaconda3\envs\pflex1\lib\site-packages (from pymc3->plateflex==0.1.0) (1.0.11) Requirement already satisfied: scipy>=0.18.1 in d:\anaconda3\envs\pflex1\lib\site-packages (from pymc3->plateflex==0.1.0) (1.10.1) Requirement already satisfied: pandas>=0.18.0 in d:\anaconda3\envs\pflex1\lib\site-packages (from pymc3->plateflex==0.1.0) (1.3.2) Requirement already satisfied: patsy>=0.5.1 in d:\anaconda3\envs\pflex1\lib\site-packages (from pymc3->plateflex==0.1.0) (0.5.3) Requirement already satisfied: fastprogress>=0.2.0 in d:\anaconda3\envs\pflex1\lib\site-packages (from pymc3->plateflex==0.1.0) (1.0.3) Requirement already satisfied: typing-extensions>=3.7.4 in d:\anaconda3\envs\pflex1\lib\site-packages (from pymc3->plateflex==0.1.0) (3.10.0.2) Requirement already satisfied: dill in d:\anaconda3\envs\pflex1\lib\site-packages (from pymc3->plateflex==0.1.0) (0.3.6) Requirement already satisfied: setuptools>=38.4 in d:\anaconda3\envs\pflex1\lib\site-packages (from arviz>=0.9.0->pymc3->plateflex==0.1.0) (59.8.0) Requirement already satisfied: packaging in d:\anaconda3\envs\pflex1\lib\site-packages (from arviz>=0.9.0->pymc3->plateflex==0.1.0) (23.1) Requirement already satisfied: xarray>=0.16.1 in d:\anaconda3\envs\pflex1\lib\site-packages (from arviz>=0.9.0->pymc3->plateflex==0.1.0) (2023.1.0) Requirement already satisfied: netcdf4 in d:\anaconda3\envs\pflex1\lib\site-packages (from arviz>=0.9.0->pymc3->plateflex==0.1.0) (1.6.3) Requirement already satisfied: pytz>=2017.3 in d:\anaconda3\envs\pflex1\lib\site-packages (from pandas>=0.18.0->pymc3->plateflex==0.1.0) (2023.3) Requirement already satisfied: six in d:\anaconda3\envs\pflex1\lib\site-packages (from patsy>=0.5.1->pymc3->plateflex==0.1.0) (1.16.0) Requirement already satisfied: cftime in d:\anaconda3\envs\pflex1\lib\site-packages (from netcdf4->arviz>=0.9.0->pymc3->plateflex==0.1.0) (1.6.2) Building wheels for collected packages: plateflex Building wheel for plateflex (setup.py) ... done Created wheel for plateflex: filename=plateflex-0.1.0-cp38-cp38-win_amd64.whl size=31851487 sha256=849e354a5fcdaaafd4d33dd49def4a76339228fe5d51c6a373eb491cb7010ffe Stored in directory: c:\users\admin\appdata\local\pip\cache\wheels\79\cc\cc\ee6ba577751b6d2336e85a873030b0fbf0cd45c726067e477e Successfully built plateflex Installing collected packages: plateflex Successfully installed plateflex-0.1.0

(pflex1) C:\Users\admin\Desktop\PlateFlex-master>python Python 3.8.16 | packaged by conda-forge | (default, Feb 1 2023, 15:53:35) [MSC v.1929 64 bit (AMD64)] on win32 Type "help", "copyright", "credits" or "license" for more information.

import plateflex Traceback (most recent call last): File "", line 1, in File "C:\Users\admin\Desktop\PlateFlex-master\plateflex__init__.py", line 157, in from . import estimate File "C:\Users\admin\Desktop\PlateFlex-master\plateflex\estimate.py", line 57, in from plateflex.flex import flex ModuleNotFoundError: No module named 'plateflex.flex'

iaomeng commented 5 months ago

have you solved this problem

LiXiong0906 commented 5 months ago

have you solved this problem

This is a very strange question. After I changed my computer, I was able to install it.

iaomeng commented 5 months ago

have you solved this problem

This is a very strange question. After I changed my computer, I was able to install it.

well ,did you use the windows or linux ,i will appreciate it if you could share your conda list of the env

LiXiong0906 commented 4 months ago

你解决这个问题了吗

这是一个很奇怪的问题。我换了电脑后就可以安装了。

好吧，你使用的是 Windows 还是 Linux，如果你能分享你的环境 conda 列表，我将不胜感激

(pflex) C:\Users\admin>conda list

packages in environment at D:\anaconda3\envs\pflex:

#

Name Version Build Channel

iaomeng commented 4 months ago

thank u very much dear friend

paudetseis / PlateFlex

Error running Ex1_making_grids #12

packages in environment at D:\anaconda3\envs\pflex:

Name Version Build Channel