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paulflang / SBML2Julia

A tool to for optimizing parameters of ordinary differential equation (ODE) models. SBML2Julia translates a model from SBML/PEtab format into Julia for Mathematical Programming (JuMP), performs the optimization task and returns the results.
https://sbml2julia.readthedocs.io/en/latest/
MIT License
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Reading measurementData into Julia #4

Closed paulflang closed 4 years ago

paulflang commented 4 years ago

I created a new branch multi_exp.

Unfortunately reading of measurementData does not yet support multiple experimental conditions (see comments in Disfit/DisFit/core.py line 339 of the multi_exp branch for more details).

The current output code for Julia can be found in DisFit/julia_code.jl of the multi_exp branch.

@sshin23 : I am struggling to fix this. Could you please give it a try? Let me know if you need more info.

sshin23 commented 4 years ago

@paulflang Please check [multi_exp 0f42f89] fix #4

paulflang commented 4 years ago

Thanks a lot, @sshin23 .